You mean Maths is the construct – the matrix (?) – by which we explain phenomena, as much as we can?Well, I've already stated that while the Universe is Math...
But the idea of humanity as part of the machine was there long before the Wachowskis.Just came to tell what the Wachowskis already realized, and presented to the world through their art.
Personally, I thought 2001 A Space Odyssey and Bladerunner, dealt with the ideas with a greater subtlety, but that's me.
Have you read Philip K Dick, he predates the Ws by twenty years?